BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F10SP1|AL426566
(802 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1721 1497 0.0
>3x_Contig1721
Length = 17834
Score = 1497 bits (754), Expect = 0.0
Identities = 785/794 (98%), Gaps = 2/794 (0%)
Strand = Plus / Minus
Query: 11 gatattctgttctgtgcacataattgtttattcacactttcatcacagttcactccagca 70
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 gatactctgttctgtgcacataattgtttattcacactttcatcacagttcactccagca 939
Query: 71 acttgtaccattccagagaggattttaccggcagatttcatggaaccttt-caattcctg 129
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 938 acttgtaccattccagagaggattttaccggcagatttcatggaaccttttcaattcctg 879
Query: 130 acagtaaccacaccacggagcataaaacatgaccaaagtggtgtaattggtcctatgaat 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 acagtaaccacaccacggagcataaaacatgaccaaagtggtgtaattggtcctatgaat 819
Query: 190 gactttatcgaagttagaaggtgtcaattccatgatattctcatcacggtcgtagaaatt 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gactttatcgaagttagaaggtgtcaattccatgatattctcatcacggtcgtagaaatt 759
Query: 250 ggctccgaacgccagtts-accaacaaaaacaatgcatatagaagacgtgtgttcatcat 308
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 758 ggctccgaacgccagttcgaccaacaaaaacaatgcatatagaagacgtgtgtacatcat 699
Query: 309 agtctggaggactttagaaaatgttcaacgatggaagttaacaaggtggtttactctctt 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 agtctggaggactttagaaaatgttcaacgatggaagttaacaaggtggtttactctctt 639
Query: 369 ctctttttgtcaatttcgagtgatgttgaatttcttggcagcagtggacccaaagatttg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ctctttttgtcaatttcgagtgatgttgaatttcttggcagcagtggacccaaagatttg 579
Query: 429 attttgaaatcgttaaaaggaacatcgatacataagaactaagaaataaggggacacgat 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 attttgaaatcgttaaaaggaacatcgatacataagaactaagaaataaggggacacgat 519
Query: 489 cccatcatcatcatcaaaggaataaggaaacacacaatagcagagccaagtgattagaga 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cccatcatcatcatcaaaggaataaggaaacacacaatagcagagccaagtgattagaga 459
Query: 549 atgtcattagaaactagttctccatacgcattttatgctttctaccagttatacagccaa 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 atgtcattagaaactagttctccatacgcattttatgctttctaccagttatacagccaa 399
Query: 609 ttttatcgcgtgccttagataacactagaaaccgtgaacgattttttgtatcaggggaaa 668
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttttatcgcgtgcctaagataacactagaaaccgtgaacgattttttgtatcaggggaaa 339
Query: 669 ggtttaaaacctgagtttgcacggagtcccctatttgtcacatggaagaagttgaagaaa 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ggtttaaaacctgagtttgcacggagtcccctatttgtcacatggaagaagttgaagaaa 279
Query: 729 ggtgaataccaacttagagggtgtattggtacgttttccgaagtamagattgaagagggt 788
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 278 ggtgaataccaacttagagggtgtattggtacgttttccgaaggtaagattgaagagggt 219
Query: 789 ttgaaaaggtacgc 802
||||||||||||||
Sbjct: 218 ttgaaaaggtacgc 205
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6810
Number of Sequences: 1807
Number of extensions: 6810
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 802
length of database: 10,358,551
effective HSP length: 16
effective length of query: 786
effective length of database: 10,329,639
effective search space: 8119096254
effective search space used: 8119096254
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)